Difference between revisions of "GeneSeqer"

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==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
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{{#if: {{#var: conf}}|==Configuration==

Revision as of 21:21, 6 December 2019

Description

geneseqer website  

GeneSeqer is a spliced alignment tool.

Required Modules

Serial

  • geneseqer

System Variables

  • HPC_GENESEQER_DIR - installation directory




Citation

If you publish research that uses geneseqer you have to cite it as follows:

Brendel, V., Xing, L. & Zhu, W. (2004) Gene structure prediction from consensus spliced alignment of multiple ESTs matching the same genomic locus. Bioinformatics 20, 1157-1169.


Validation

  • Validated 4/5/2018