GenGen

Description

gengen website  

GenGen is a suite of free software tools to facilitate the analysis of high-throughput genomics data sets. The package is currently a work-in-progress and infrequently updated.

Required Modules

Serial

• gcc/5.2.0
• gengen

System Variables

• HPC_{{#uppercase:gengen}}_DIR - installation directory
• HPC_{{#uppercase:gengen}}_EXE - example directory
• HPC_{{#uppercase:gengen}}_DOC - documentation directory

Citation

If you publish research that uses gengen you have to cite it as follows:

Wang K, Li M, Bucan M. Pathway-based approaches for analysis of genome-wide association studies. American Journal of Human Genetics, 81:1278-1283, 2007

Wang K, Li M, Hakonarson H. Analysing biological pathways from genome-wide association studies. Nature Reviews Genetics, 11:843-854, 2010