Difference between revisions of "GARLI"
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| − | + | __NOTOC__ | |
| + | __NOEDITSECTION__ | ||
| + | [[Category:Software]] | ||
| + | <!-- ######## Template Configuration ######## --> | ||
| + | <!--Edit definitions of the variables used in template calls | ||
| + | Required variables: | ||
| + | app - lowercase name of the application e.g. "amber" | ||
| + | url - url of the software page (project, company product, etc) - e.g. "http://ambermd.org/" | ||
| + | Optional variables: | ||
| + | INTEL - Version of the Intel Compiler e.g. "11.1" | ||
| + | MPI - MPI Implementation and version e.g. "openmpi/1.3.4" | ||
| + | --> | ||
| + | {| | ||
| + | <!--Main settings - REQUIRED--> | ||
| + | |{{#vardefine:app|test}} | ||
| + | |{{#vardefine:url|http://sourceforge.net}} | ||
| + | <!--Compiler and MPI settings - OPTIONAL --> | ||
| + | |{{#vardefine:intel|}} <!-- E.g. "11.1" --> | ||
| + | |{{#vardefine:mpi|}} <!-- E.g. "openmpi/1.3.4" --> | ||
| + | <!--Choose sections to enable - OPTIONAL--> | ||
| + | |{{#vardefine:mod|1}} <!--Present instructions for running the software with modules --> | ||
| + | |{{#vardefine:exe|}} <!--Present manual instructions for running the software --> | ||
| + | |{{#vardefine:conf|}} <!--Enable config wiki page link - {{#vardefine:conf|1}} = ON/conf|}} = OFF--> | ||
| + | |{{#vardefine:pbs|}} <!--Enable PBS script wiki page link--> | ||
| + | |{{#vardefine:policy|}} <!--Enable policy section --> | ||
| + | |{{#vardefine:testing|}} <!--Enable performance testing/profiling section --> | ||
| + | |{{#vardefine:faq|}} <!--Enable FAQ section --> | ||
| + | |{{#vardefine:citation|}} <!--Enable Reference/Citation section --> | ||
| + | |} | ||
| + | <!-- ######## Template Body ######## --> | ||
| + | <!--Description--> | ||
| + | {{#if: {{#var: url}}| | ||
| + | {{App_Description|app={{#var:app}}|url={{#var:url}}}}|}} | ||
| + | PASTE OR ENTER EXTENDED DESCRIPTION HERE OR REMOVE THIS LINE | ||
| + | [PASTE A LINK TO UPSTREAM DOCS OR REMOVE THIS LINE Upstream documentation] for {{#var:app}}. | ||
| + | <!--Location--> | ||
| + | {{App_Location|app={{#var:app}}|{{#var:ver}}}} | ||
| + | ADD EXECUTABLE AND LIBRARY LOCATION DETAILS FOR INSTALLED VERSIONS OR REMOVE THIS MESSAGE | ||
| + | <!-- --> | ||
| + | {{#if: {{#var: mod}}|==Running the application using modules== | ||
| + | {{App_Module|app={{#var:app}}|intel={{#var:intel}}|mpi={{#var:mpi}}}}|}} | ||
| + | {{#if: {{#var: exe}}|==How To Run== | ||
| + | WRITE INSTRUCTIONS ON RUNNING THE ACTUAL BINARY|}} | ||
| + | {{#if: {{#var: conf}}|==Configuration== | ||
| + | See the [[{{PAGENAME}}_Configuration]] page for {{#var: app}} configuration details.|}} | ||
| + | {{#if: {{#var: pbs}}|==PBS Script Examples== | ||
| + | See the [[{{PAGENAME}}_PBS]] page for {{#var: app}} PBS script examples.|}} | ||
| + | {{#if: {{#var: policy}}|==Usage policy== | ||
| + | WRITE USAGE POLICY HERE (perhaps templates for a couple of main licensing schemes can be used)|}} | ||
| + | {{#if: {{#var: testing}}|==Performance== | ||
| + | WRITE PERFORMANCE TESTING RESULTS HERE|}} | ||
| + | {{#if: {{#var: faq}}|==FAQ== | ||
| + | *'''Q:''' **'''A:'''|}} | ||
| + | {{#if: {{#var: citation}}|==Citation== | ||
| + | If you publish research that uses {{{app}}} you have to cite it as follows: | ||
| + | WRITE CITATION HERE | ||
| + | |}} | ||
Revision as of 20:35, 26 October 2011
Description
{{{name}}} website
PASTE OR ENTER EXTENDED DESCRIPTION HERE OR REMOVE THIS LINE
[PASTE A LINK TO UPSTREAM DOCS OR REMOVE THIS LINE Upstream documentation] for test.
Template:App Location
ADD EXECUTABLE AND LIBRARY LOCATION DETAILS FOR INSTALLED VERSIONS OR REMOVE THIS MESSAGE
Running the application using modules
To use test with the environment modules system at HPC the following commands are available:
Get module information for garli:
$module spider test
Load the default application module:
$module load test
The modulefile for this software adds the directory with executable files to the shell execution PATH and sets the following environment variables:
- HPC_TEST_DIR - directory where test is located.