GAML
Revision as of 18:39, 15 June 2015 by Moskalenko (talk | contribs)
Description
GAML - Genome Assembly by Maximum Likelihood - is a prototype genome assembly tool based on maximizing likelihood of the assembly in a model encompaasing error rate, insert length and other features of indvidual sequencing technologies. It can combine datasets produced by different technologies (currently Illumina, 454 and Pacific Biosciences).
Required Modules
Serial
- GAML
System Variables
- HPC_{{#uppercase:GAML}}_DIR - installation directory