Difference between revisions of "Fathmm"

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(Created page with "Category:SoftwareCategoy:BioinformaticsCategory:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|fathmm}} |{{#vardefine:url|http://fathmm.biocompute.org...")
 
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==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Latest revision as of 21:20, 6 December 2019

Description

fathmm website  

Functional Analysis through Hidden Markov Models (v2.3). High-throughput software capable of predicting the functional consequences of both coding variants, i.e. non-synonymous single nucleotide variants (nsSNVs), and non-coding variants.

Required Modules

Serial

  • fathmm

System Variables

  • HPC_FATHMM_DIR - installation directory