Difference between revisions of "FIGARO"
Jump to navigation
Jump to search
(Created page with "Category:SoftwareCategory:Phylogentics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|figaro}} |{{#vardefine:url|https://github.com/Zymo-Research/figaro}} <!--CONF...") |
|||
| Line 1: | Line 1: | ||
| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Phylogenetics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|figaro}} | |{{#vardefine:app|figaro}} | ||
Latest revision as of 16:27, 15 December 2021
Description
FIGARO is a program written by the folks at Zymo Research to take the guess work out of deciding what truncation parameters to use with the QIIME2 DADA2 plug-in.
Environment Modules
Run module spider figaro to find out what environment modules are available for this application.
System Variables
- HPC_FIGARO_DIR - installation directory
- HPC_FIGARO_BIN - executable directory
Citation
If you publish research that uses figaro you have to cite it as follows:
FIGARO: An efficient and objective tool for optimizing microbiome rRNA gene trimming parameters