Difference between revisions of "Exonerate"

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m (Text replace - "{{#if: {{#var: mod}}|==Execution Environment and Modules== {{App_Module|app={{#var:app}}|intel={{#var:intel}}|mpi={{#var:mpi}}}}|}}" to "==Required Modules== modules documentation ===Serial=== *{{#var:app}}")
m (Text replace - "<!--Run-->" to "==System Variables== * HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory <!--Run--> ")
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*{{#var:app}}
 
*{{#var:app}}
 
<!--Add additional HPC_FOO_BIN and other ENV VARIABLES below-->
 
<!--Add additional HPC_FOO_BIN and other ENV VARIABLES below-->
 +
==System Variables==
 +
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
 
<!--Run-->
 
<!--Run-->
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{{#if: {{#var: exe}}|==How To Run==
 
{{#if: {{#var: exe}}|==How To Run==
 
DOUBLE_CLICK_TO_WRITE_INSTRUCTIONS_ON_RUNNING_THE_ACTUAL_BINARY
 
DOUBLE_CLICK_TO_WRITE_INSTRUCTIONS_ON_RUNNING_THE_ACTUAL_BINARY

Revision as of 17:21, 10 August 2012

Description

exonerate website  

  • Exonerate is a generic tool for pairwise sequence comparison.
  • It allows you to align sequences using a many alignment models, using either exhaustive dynamic programming, or a variety of heuristics.
  • If you have questions, you can email the Author.

Required Modules

modules documentation

Serial

  • exonerate

System Variables

  • HPC_{{#uppercase:exonerate}}_DIR - installation directory