EMMAX

From UFRC
Revision as of 21:20, 6 December 2019 by Moskalenko (talk | contribs) (Text replacement - "#uppercase" to "uc")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigation Jump to search

Description

emmax website  

EMMAX is a statistical test for large scale human or model organism association mapping accounting for the sample structure. In addition to the computational efficiency obtained by EMMA algorithm, EMMAX takes advantage of the fact that each loci explains only a small fraction of complex traits, which allows us to avoid repetitive variance component estimation procedure, resulting in a significant amount of increase in computational time of association mapping using mixed model.

Required Modules

Serial

  • emmax

Parallel (OpenMP)

  • intel/2013.sp1.3.174
  • emmax

System Variables

  • HPC_EMMAX_DIR - installation directory