Difference between revisions of "Dibig Tools"
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 21:20, 6 December 2019
Description
dibig_tools is a collection of useful tools and scripts for HiPerGator. This module currently includes the following tools:
- FASTools
- DEMUX
- MethylMapper
- submit.py – User-friendly replacement for qsub
- actor.py – Self-documenting scripts for HiPerGator
- split-sam.sh – Split large SAM/BAM files.
Required Modules
Serial
- dibig
System Variables
- HPC_DIBIG_DIR - installation directory
- HPC_DIBIG_BIN - executable directory
Validation
- Validated 4/5/2018
