Difference between revisions of "DeepPicker"
Jump to navigation
Jump to search
Moskalenko (talk | contribs) |
|||
| Line 1: | Line 1: | ||
| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Machine Learning]][[Category:Cross-Molecule Training]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|deeppicker}} | |{{#vardefine:app|deeppicker}} | ||
Revision as of 18:18, 7 July 2017
Description
DeepPicker employs a novel cross-molecule training strategy to capture common features of particles from previously-analyzed micrographs, and thus does not require any human intervention during particle picking.
Required Modules
System Variables
- HPC_{{#uppercase:deeppicker}}_DIR - installation directory
- HPC_{{#uppercase:deeppicker}}_BIN - executables directory
Additional Information
This software is installed in a container.
Basic usage:
launch_deeppicker autoPick.py --help
To see the list of available executables:
launch_deeppicker ls $HPC_DEEPPICKER_BIN