Difference between revisions of "DNA Clust"
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| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Biology]][[Category:Genomics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|dnaclust}} | |{{#vardefine:app|dnaclust}} | ||
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A tool for clustering large number of short similar DNA sequences. This program is originally designed for clustering targeted 16S rRNA pyrosequencing reads. | A tool for clustering large number of short similar DNA sequences. This program is originally designed for clustering targeted 16S rRNA pyrosequencing reads. | ||
<!--Modules--> | <!--Modules--> | ||
| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{uc:{{#var:app}}}}_DIR | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
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Latest revision as of 18:50, 12 August 2022
Description
A tool for clustering large number of short similar DNA sequences. This program is originally designed for clustering targeted 16S rRNA pyrosequencing reads.
Environment Modules
Run module spider dnaclust to find out what environment modules are available for this application.
System Variables
- HPC_DNACLUST_DIR - installation directory