Difference between revisions of "Crux"
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Moskalenko (talk | contribs) (Created page with "Category:SoftwareCategory:BioinformaticsCategory:Spectroscopy {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|crux}} |{{#vardefine:url|http://noble.gs.washingto...") |
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==System Variables== | ==System Variables== | ||
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory | * HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory | ||
| + | * HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory | ||
| + | * HPC_{{#uppercase:{{#var:app}}}}_DOC - html documentation directory | ||
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 16:14, 18 November 2014
Description
Crux is a software toolkit for tandem mass spectrometry analysis, with a focus on peptide identification.
Required Modules
System Variables
- HPC_{{#uppercase:crux}}_DIR - installation directory
- HPC_{{#uppercase:crux}}_BIN - executable directory
- HPC_{{#uppercase:crux}}_DOC - html documentation directory
Citation
If you publish research that uses crux you have to cite it as follows:
Christopher Y. Park, Aaron A. Klammer, Lukas Käll, Michael J. MacCoss and William Stafford Noble. "Rapid and accurate peptide identification from tandem mass spectra." Journal of Proteome Research. 7(7):3022--3027, 2008.