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crass website  

Crass is a program that searches through raw metagenomic reads for Clustered Regularly Interspersed Short Palindromic Repeats

Environment Modules

Run module spider crass to find out what environment modules are available for this application.

System Variables

  • HPC_CRASS_DIR - installation directory
  • HPC_CRASS_BIN - executable directory
  • HPC_CRASS_DOC - documentation directory
  • HPC_CRASS_MAN - manual directory


If you publish research that uses crass you have to cite it as follows:

Connor T. Skennerton, Michael Imelfort, and Gene W. Tyson Crass: identification and reconstruction of CRISPR from unassembled metagenomic data Nucl. Acids Res. (2013) 41(10): e105