Crass

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Description

crass website  

Crass is a program that searches through raw metagenomic reads for Clustered Regularly Interspersed Short Palindromic Repeats

Required Modules

Serial

  • gcc/5.2.0
  • crass

System Variables

  • HPC_CRASS_DIR - installation directory
  • HPC_CRASS_BIN - executable directory
  • HPC_CRASS_DOC - documentation directory
  • HPC_CRASS_MAN - manual directory





Citation

If you publish research that uses crass you have to cite it as follows:

Connor T. Skennerton, Michael Imelfort, and Gene W. Tyson Crass: identification and reconstruction of CRISPR from unassembled metagenomic data Nucl. Acids Res. (2013) 41(10): e105


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