Difference between revisions of "Crass"
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(Created page with "Category:SoftwareCategory:BiologyCategory:Assembly {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|crass}} |{{#vardefine:url|https://github.com/ctSkennerton/cra...") |
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==System Variables== | ==System Variables== | ||
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory | * HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory | ||
| + | * HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory | ||
| + | * HPC_{{#uppercase:{{#var:app}}}}_DOC - documentation directory | ||
| + | * HPC_{{#uppercase:{{#var:app}}}}_MAN - manual directory | ||
| + | |||
| + | |||
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 13:40, 30 March 2017
Description
Crass is a program that searches through raw metagenomic reads for Clustered Regularly Interspersed Short Palindromic Repeats
Required Modules
Serial
- gcc/5.2.0
- crass
System Variables
- HPC_{{#uppercase:crass}}_DIR - installation directory
- HPC_{{#uppercase:crass}}_BIN - executable directory
- HPC_{{#uppercase:crass}}_DOC - documentation directory
- HPC_{{#uppercase:crass}}_MAN - manual directory
Citation
If you publish research that uses crass you have to cite it as follows: