Difference between revisions of "Connectomemapper3"
Jump to navigation
Jump to search
(Created page with "Category:SoftwareCategory:Image processing {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|connectomemapper3}} |{{#vardefine:url|https://github.com/connectomicslab/...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Phylogenetics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|connectomemapper3}} | |{{#vardefine:app|connectomemapper3}} | ||
| Line 18: | Line 18: | ||
{{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}} | {{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}} | ||
| − | Connectome Mapper 3 | + | Connectome Mapper 3 implements a full diffusion MRI processing pipeline that understands BIDS datasets, from raw Diffusion / T1 / T2 data to multi-resolution connection matrices. The Connectome Mapper 3 is part of the Connectome Mapping Toolkit. |
<!--Modules--> | <!--Modules--> | ||
| Line 25: | Line 25: | ||
==System Variables== | ==System Variables== | ||
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
| + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory | ||
| + | |||
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 13:55, 15 August 2022
Description
Connectome Mapper 3 implements a full diffusion MRI processing pipeline that understands BIDS datasets, from raw Diffusion / T1 / T2 data to multi-resolution connection matrices. The Connectome Mapper 3 is part of the Connectome Mapping Toolkit.
Environment Modules
Run module spider connectomemapper3 to find out what environment modules are available for this application.
System Variables
- HPC_CONNECTOMEMAPPER3_DIR - installation directory
- HPC_CONNECTOMEMAPPER3_BIN - executable directory