Cactus
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Description
Cactus is a reference-free whole-genome multiple alignment program. Please cite the Progressive Cactus paper when using Cactus. Additional descriptions of the core algorithms can be found here and here.
Environment Modules
Run module spider cactus to find out what environment modules are available for this application.
System Variables
- HPC_CACTUS_DIR - installation directory
- HPC_CACTUS_BIN - executable directory
Citation
If you publish research that uses cactus you have to cite it as follows:
https://www.nature.com/articles/s41586-020-2871-y