Difference between revisions of "CRISPRanalyzer"

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(Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|crispranalyzer}} |{{#vardefine:url|https://github.com/boutroslab/CRISPRAnaly...")
 
 
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==System Variables==
 
==System Variables==
 
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 +
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
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<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Latest revision as of 22:16, 26 August 2020

Description

crispranalyzer website  

CRISPRAnalyzeR has been developed to provide a fully-interactive and exploratory analysis of pooled CRISPR Screens with user experience in mind. You can analyse your screen using 8 different analysis methods as well as perform gene annotation, gene set analysis and get detailed information about your sgRNAs - all in a convenient web-browser interface.

Environment Modules

Run module spider crispranalyzer to find out what environment modules are available for this application.

System Variables

  • HPC_CRISPRANALYZER_DIR - installation directory
  • HPC_CRISPRANALYZER_BIN - executable directory




Citation

If you publish research that uses crispranalyzer you have to cite it as follows:

http://biorxiv.org/content/early/2017/02/20/109967