Difference between revisions of "CONCOCT"
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| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Biology]][[Category:Genomics]] |
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Warning! This software is to be considered under development. Functionality and the user interface may still change significantly from one version to another. If you want to use this software, please stay up to date with the list of known issues: [https://github.com/BinPro/CONCOCT/issues https://github.com/BinPro/CONCOCT/issues] | Warning! This software is to be considered under development. Functionality and the user interface may still change significantly from one version to another. If you want to use this software, please stay up to date with the list of known issues: [https://github.com/BinPro/CONCOCT/issues https://github.com/BinPro/CONCOCT/issues] | ||
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==System Variables== | ==System Variables== | ||
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Latest revision as of 18:39, 12 August 2022
Description
CONCOCT is a program for unsupervised binning of metagenomic contigs by using nucleotide composition, coverage data in multiple samples and linkage data from paired end reads.
Warning! This software is to be considered under development. Functionality and the user interface may still change significantly from one version to another. If you want to use this software, please stay up to date with the list of known issues: https://github.com/BinPro/CONCOCT/issues
Environment Modules
Run module spider concoct to find out what environment modules are available for this application.
System Variables
- HPC_CONCOCT_DIR - installation directory