CGATools
Revision as of 17:21, 10 August 2012 by Moskalenko (talk | contribs) (Text replace - "<!--Run-->" to "==System Variables== * HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory <!--Run--> ")
Description
The Complete Genomics Analysis Tools (cgatools) is an open source project to provide tools for downstream analysis of Complete Genomics data. The focus is to provide command line utilities, but a C++ API is available as well. The general areas of functionality include genome comparison, format conversion, and reference tools.
Required Modules
Serial
- cgatools
- HPC_CGATOOLS_BIN - executable directory
- HPC_CGATOOLS_INC - includes directory
- HPC_CGATOOLS_DOC - documentation directory
System Variables
- HPC_{{#uppercase:cgatools}}_DIR - installation directory
Citation
If you publish research that uses cgatools you have to cite it as follows: R. Drmanac, et. al. Science 327(5961), 78. [DOI: 10.1126/science.1181498]