Difference between revisions of "Bamtools"
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Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
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*{{#var:app}} | *{{#var:app}} | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
==Additional tools== | ==Additional tools== | ||
We also provide small tools that depend on bamtools or are built against it within this module. | We also provide small tools that depend on bamtools or are built against it within this module. | ||
Revision as of 21:12, 6 December 2019
Description
BamTools is a project that provides both a C++ API and a command-line toolkit for reading, writing, and manipulating BAM (genome alignment) files.
Required Modules
Serial
- bamtools
System Variables
- HPC_BAMTOOLS_DIR - installation directory
Additional tools
We also provide small tools that depend on bamtools or are built against it within this module.
- bamaddrg (2012-01-27 build against bamtools 0.9.4).
Validation
- Validated 4/5/2018