Difference between revisions of "Bamstats"

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[[Category:Software]]
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[[Category:Software]][[Category:Biology]][[Category:NGS]]
 
{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|bamstats}}
 
|{{#vardefine:app|bamstats}}

Latest revision as of 18:01, 12 August 2022

Description

bamstats website  

Coverage statistics for a BED file. It uses the Cigar string instead of the start/end to compute the coverage.

Environment Modules

Run module spider bamstats to find out what environment modules are available for this application.

System Variables

  • HPC_BAMSTATS_DIR - installation directory