Difference between revisions of "BRATNextGen"
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
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{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 21:01, 6 December 2019
Description
BratNextGen is a software tool designed for the detection of recombination events within large bacterial data sets. BratNextGen can be used for analysing aligned whole genome data sets. The output of BratNextGen consists of detected recombinogenic segments.
Required Modules
Serial
- BRATNextGen
System Variables
- HPC_BRATNEXTGEN_DIR - installation directory
Validation
- Validate 4/5/2018