Difference between revisions of "BPP"

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[[Category:Software]][[Category:Bioinformatics]][[Category:Phylogenetics]]
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[[Category:Software]][[Category:Biology]][[Category:Phylogenetics]]
 
{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|bpp}}
 
|{{#vardefine:app|bpp}}

Latest revision as of 18:21, 12 August 2022

Description

bpp website  

The program BP&P implements the Bayesian methods of Yang (2002), Rannala & Yang (2003), Burgess & Yang (2008), and Yang & Rannala (2010), for estimating population sizes (theta), species divergence times (tau), and for delimiting species using multi-locus sequence data from several closely related species.

Environment Modules

Run module spider bpp to find out what environment modules are available for this application.

System Variables

  • HPC_BPP_DIR - installation directory

Additional Information

Sample '.ctl' files are in the '$HPC_BPP_CTL' directory. You need to copy one of them to your current working directory and modify it before running bpp.