Difference between revisions of "BEAR"

From UFRC
Jump to navigation Jump to search
m (Text replacement - "#uppercase" to "uc")
Line 24: Line 24:
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
+
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
  
 
<!--Configuration-->
 
<!--Configuration-->

Revision as of 21:00, 6 December 2019

Description

bear website  

BEAR is intended to be an easy-to-use collection of scripts for simulated WGS metagenomic reads with read lengths, quality scores, profiles, and species abundances derived from real user-supplied WGS data. for commercial purposes, please contact us.

Environment Modules

Run module spider bear to find out what environment modules are available for this application.

System Variables

  • HPC_BEAR_DIR - installation directory
  • HPC_BEAR_BIN - executable directory