Difference between revisions of "ASTRID"

From UFRC
Jump to navigation Jump to search
(Created page with "Category:Software {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|astrid}} |{{#vardefine:url|http://pranjalv123.github.io/ASTRID/}} <!--CONFIGURATION: OPTIONAL (|1}} me...")
 
 
(3 intermediate revisions by 3 users not shown)
Line 1: Line 1:
[[Category:Software]]
+
[[Category:Software]][[Category:Phylogenetics]]
 
{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|astrid}}
 
|{{#vardefine:app|astrid}}
Line 21: Line 21:
  
 
<!--Modules-->
 
<!--Modules-->
==Required Modules==
+
==Environment Modules==
 +
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 +
==System Variables==
 +
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 +
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
  
===Serial===
 
* {{#var:app}}
 
<!--
 
===Parallel (OpenMP)===
 
* intel
 
* {{#var:app}}
 
===Parallel (MPI)===
 
* intel
 
* openmpi
 
* {{#var:app}}
 
-->
 
==System Variables==
 
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
 
 
<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Latest revision as of 15:16, 12 August 2022

Description

astrid website  

ASTRID is a ILS-aware tool for species tree estimation.

Environment Modules

Run module spider astrid to find out what environment modules are available for this application.

System Variables

  • HPC_ASTRID_DIR - installation directory
  • HPC_ASTRID_BIN - executable directory