Difference between revisions of "APT"

From UFRC
Jump to navigation Jump to search
Line 68: Line 68:
 
<!--Turn the Table of Contents and Edit paragraph links ON/OFF-->
 
<!--Turn the Table of Contents and Edit paragraph links ON/OFF-->
 
__NOTOC____NOEDITSECTION__
 
__NOTOC____NOEDITSECTION__
 +
=Validation=
 +
* Validated 4/5/2018

Revision as of 17:35, 5 April 2018

Description

apt website  

Affymetrix Power Tools (APT) are a set of cross-platform command line programs that implement algorithms for analyzing and working with Affymetrix GeneChip® arrays. APT is an open-source project licensed under the GNU General Public License (GPL). (Developers who need a non-GPL license may purchase a commercial license from Affymetrix.) APT programs are intended for "power users" who prefer programs that can be utilized in scripting environments and are sophisticated enough to handle the complexity of extra features and functionality. The vision is that APT provides a platform for developing and deploying new algorithms without waiting for the GUI implementations.

Required Modules

Serial

  • apt

System Variables

  • HPC_{{#uppercase:apt}}_DIR - Installation directory
  • HPC_APT_BIN - Executable directory




Installation

See the APT_Install page for apt installation notes.

Validation

  • Validated 4/5/2018