Difference between revisions of "3d-dna"
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Revision as of 14:41, 3 June 2022
Description
This code is designed to enable anyone to reproduce the Hs2-HiC and the AaegL4 genomes reported in: Dudchenko et al., De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds. Science, 2017.
Required Modules
Serial
- 3d-dna
System Variables
- HPC_3D-DNA_DIR - installation directory
- HPC_3D-DNA_BIN - executable directory
Citation
If you publish research that uses 3d-dna you have to cite it as follows: