Difference between revisions of "3d-dna"
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Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
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| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
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*'''Q:''' **'''A:'''|}} | *'''Q:''' **'''A:'''|}} | ||
<!--Citation--> | <!--Citation--> | ||
| − | {{#if: {{#var: citation}}|==Citation== | + | {{#if: {{#var: citation}}1|==Citation== |
If you publish research that uses {{#var:app}} you have to cite it as follows: | If you publish research that uses {{#var:app}} you have to cite it as follows: | ||
Latest revision as of 17:51, 10 June 2022
Description
This code is designed to enable anyone to reproduce the Hs2-HiC and the AaegL4 genomes reported in: Dudchenko et al., De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds. Science, 2017.
Environment Modules
Run module spider 3d-dna to find out what environment modules are available for this application.
System Variables
- HPC_3D-DNA_DIR - installation directory
- HPC_3D-DNA_BIN - executable directory
Citation
If you publish research that uses 3d-dna you have to cite it as follows: