UFRC Help and Documentation

Welcome to the University of Florida Research Computing Help and Documentation site. The information here is focused on particular applications, services, and usage examples and complements more general policies and information found on our main web site. It is used for information that changes more frequently and might become quickly dated or incorrect on the web site. This site is edited by individual UFRC staff members. If you find inaccuracies, errors, or omissions on this site please let us know.

Getting Started

Getting Started Mailing Lists Events Calendar Training and How-To Videos

Non-Batch System Resources Interactive Development and Testing GUI Programs Blocked Accounts

SSH Key Creation (Windows) Submit a Support Request Storage Types and Procedures Practical Storage Use Teaching Support

Software and Libraries

Installed Applications Software Development

Environment Modules System Available Compilers

GPU Access Collection of UFRC Utilities

Batch System

SLURM Commands Using Variables in SLURM SLURM Job Arrays

Account and QOS Limits Under SLURM Big Memory Partition

Annotated Job Script Walk-through Sample SLURM Scripts

Connecting and Data Transfer

Samba Access

Globus

Transfer Data

Specific Research Areas

Biological Research Computing Bioinformatics Software

R (BioConductor) Blast Databases

Galaxy Genomics Framework