Difference between revisions of "Talk:BioC Requirements Information Gathering"
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General requirements | General requirements | ||
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| + | == Job lenght -- [[User:Magitz|Magitz]] 09:37, 31 October 2011 (EDT) == | ||
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| + | A fair amount of the Soltis Lab usage of the cluster will be for phylogenetic analyses. Many of these last 1-2 weeks, with a few as long as a month. Being able to schedule longer jobs will be important. However, my sense is that things have improved from where we were a few years ago, in that we rearely need jobs that run over a month. Between checkpointing and better software, most of the analyses that I've seen running over 30days on our lab cluster or Fisher were | ||
| + | #forgotten about by the user who started them and no longer needed | ||
| + | #set up with unrealistic expectations (jobs on bootstrap replicate 3 after 30 days set to run for 1,000 replicates, etc) | ||
| + | #could have been set up in way to complete within a month | ||
Revision as of 13:37, 31 October 2011
Availability -- Malex 16:35, 19 October 2011 (EDT)
Discussion of the Storage and Processing resource availability
General -- Malex 16:35, 19 October 2011 (EDT)
General requirements
Job lenght -- Magitz 09:37, 31 October 2011 (EDT)
A fair amount of the Soltis Lab usage of the cluster will be for phylogenetic analyses. Many of these last 1-2 weeks, with a few as long as a month. Being able to schedule longer jobs will be important. However, my sense is that things have improved from where we were a few years ago, in that we rearely need jobs that run over a month. Between checkpointing and better software, most of the analyses that I've seen running over 30days on our lab cluster or Fisher were
- forgotten about by the user who started them and no longer needed
- set up with unrealistic expectations (jobs on bootstrap replicate 3 after 30 days set to run for 1,000 replicates, etc)
- could have been set up in way to complete within a month