Difference between revisions of "Installed Software"

Revision as of 16:29, 30 May 2008

The following is a list of the installed software packages maintained at the UF HPC Center

Software

Software	Version	Home Website
Abaqus	6.6-1	www.abaqus.com
Adina	8.3	www.adina.com
Amber	9	amber.scripps.edu
Ansys	10.0	www.ansys.com
AUTO3DEM	3.05	cryoem.ucsd.edu
Blender	2.45	www.blender.org
ccp4	6.0.2	www.ccp4.ac.uk
CMSSW	2_0_6	CMS Software Twiki
cnssolve	1.2	cns.csb.yale.edu
Crystal	1.0.2
dlpoly	3.0.7	www.cse.clrc.ac.uk
dock	6.1	dock.compbio.ucsf.edu
Eman	1.8	blake.bcm.tms.edu
Ensight	8.2	www.ensight.com
Fragstats	2.0	www.umass.edu
FSL	3.3.11	www.fmrib.ox.ac.uk
gaussian	03	www.gaussian.com
Geant	4.8.2	geant4.web.cern.ch
Gromacs	3.3.1	www.gromacs.org
GULP	3.1	www.ivec.org
hypre	2.0.0	Lawrence Livermore National Labs
Matlab	7.6	www.mathworks.com
meme	3.0.13	meme.sdsc.edu
metis	4.0	glaros.dtc.umn.edu
mpiBlast	1.5.0	NCBI
NAMD	2.6	www.ks.uiuc.edu
PWscf	3.0	www.pwscf.org
Rosetta	2.1.2	www.rosettacommons.org
R	2.5.0	www.r-project.org
SAS	9.1	SAS
Siesta	2.0	www.uam.es
Stata	10	Stata
VASP	4.6.28	cms.mpi.univie.ac.at

Libraries

Library	Version	Compiler	Location
FFTW	2.1.5	Intel	/opt/intel/fftw/2.1.5/lib

@@ Line 3: / Line 3: @@
 {| border="1"
 ! Software !! Version !! Home Website
-|-
-| [[hypre]] || 2.0.0 || [http://www.llnl.gov/casc/hypre/software.html Lawrence Livermore National Labs]
-|-
-| [[GULP]] || 3.1 || [https://www.ivec.org/GULP/ www.ivec.org]
-|-
-| [[Gromacs]] || 3.3.1 || [http://www.gromacs.org/ www.gromacs.org]
-|-
-| [[Amber]] || 9 || [http://amber.scripps.edu/ amber.scripps.edu]
-|-
-| [[gaussian]] || 03 || [http://www.gaussian.com/ www.gaussian.com]
 |-
 | [[Abaqus]] || 6.6-1 || [http://www.abaqus.com/ www.abaqus.com]
 |-
 | [[Adina]] || 8.3 || [http://www.adina.com/ www.adina.com]
+|-
+| [[Amber]] || 9 || [http://amber.scripps.edu/ amber.scripps.edu]
 |-
 | [[Ansys]] || 10.0 || [http://www.ansys.com/ www.ansys.com]
 |-
-| [[mpiBlast]] || 1.5.0 || [http://www.ncbi.nlm.nih.gov/ NCBI]
+| [[AUTO3DEM]] || 3.05 || [http://cryoem.ucsd.edu/programs.shtm cryoem.ucsd.edu]
+|-
+| [[Blender]] || 2.45 || [http://www.blender.org www.blender.org]
 |-
 | [[ccp4]] || 6.0.2 || [http://www.ccp4.ac.uk/main.html www.ccp4.ac.uk]
 |-
-| [[Crystal]] || 1.0.2 || &nbsp;
+| [[CMSSW]] || 2_0_6 || [https://twiki.cern.ch/twiki/bin/view/CMS CMS Software Twiki]
 |-
-| [[Ensight]] || 8.2 || [http://www.ensight.com/ www.ensight.com]
+| [[cnssolve]] || 1.2 || [http://cns.csb.yale.edu/v1.1/ cns.csb.yale.edu]
 |-
-| [[cnssolve]] || 1.2 || [http://cns.csb.yale.edu/v1.1/ cns.csb.yale.edu]
+| [[Crystal]] || 1.0.2 || &nbsp;
 |-
 | [[dlpoly]] || 3.0.7 || [http://www.cse.clrc.ac.uk/ccg/software/DL_POLY/index.shtml www.cse.clrc.ac.uk]
@@ Line 36: / Line 30: @@
 | [[Eman]] || 1.8 || [http://blake.bcm.tmc.edu/eman/ blake.bcm.tms.edu]
 |-
-| [[PWscf]] || 3.0 || [http://www.pwscf.org/download.htm www.pwscf.org]
+| [[Ensight]] || 8.2 || [http://www.ensight.com/ www.ensight.com]
 |-
 | [[Fragstats]] || 2.0 || [http://www.umass.edu/landeco/research/fragstats/fragstats.html www.umass.edu]
 |-
 | [[FSL]] || 3.3.11 || [http://www.fmrib.ox.ac.uk/fsl/ www.fmrib.ox.ac.uk]
+|-
+| [[gaussian]] || 03 || [http://www.gaussian.com/ www.gaussian.com]
 |-
 | [[Geant]] || 4.8.2 || [http://geant4.web.cern.ch/geant4/ geant4.web.cern.ch]
+|-
+| [[Gromacs]] || 3.3.1 || [http://www.gromacs.org/ www.gromacs.org]
+|-
+| [[GULP]] || 3.1 || [https://www.ivec.org/GULP/ www.ivec.org]
+|-
+| [[hypre]] || 2.0.0 || [http://www.llnl.gov/casc/hypre/software.html Lawrence Livermore National Labs]
+|-
+| [[Matlab]] || 7.6 || [http://www.mathworks.com www.mathworks.com]
 |-
 | [[meme]] || 3.0.13 || [http://meme.sdsc.edu/meme/intro.html meme.sdsc.edu]
 |-
 | [[metis]] || 4.0 || [http://glaros.dtc.umn.edu/gkhome/views/metis glaros.dtc.umn.edu]
+|-
+| [[mpiBlast]] || 1.5.0 || [http://www.ncbi.nlm.nih.gov/ NCBI]
 |-
 | [[NAMD]] || 2.6 || [http://www.ks.uiuc.edu/Research/namd/ www.ks.uiuc.edu]
 |-
-| [[R]] || 2.5.0 || [http://www.r-project.org www.r-project.org]
+| [[PWscf]] || 3.0 || [http://www.pwscf.org/download.htm www.pwscf.org]
 |-
 | [[Rosetta]] || 2.1.2 || [https://www.rosettacommons.org/ www.rosettacommons.org]
 |-
-| [[Siesta]] || 2.0 || [http://www.uam.es/departamentos/ciencias/fismateriac/siesta/ www.uam.es]
+| [[R]] || 2.5.0 || [http://www.r-project.org www.r-project.org]
 |-
-| [[VASP]] || 4.6.28 || [http://cms.mpi.univie.ac.at/vasp/ cms.mpi.univie.ac.at]
+| [[SAS]] || 9.1 || [http://www.sas.com SAS]
 |-
-| [[Matlab]] || 7.6 || [http://www.mathworks.com www.mathworks.com]
+| [[Siesta]] || 2.0 || [http://www.uam.es/departamentos/ciencias/fismateriac/siesta/ www.uam.es]
 |-
-| [[Blender]] || 2.45 || [http://www.blender.org www.blender.org]
+| [[Stata]] || 10 || [http://www.stata.com/ Stata]
 |-
-| [[AUTO3DEM]] || 3.05 || [http://cryoem.ucsd.edu/programs.shtm cryoem.ucsd.edu]
+| [[VASP]] || 4.6.28 || [http://cms.mpi.univie.ac.at/vasp/ cms.mpi.univie.ac.at]
-|-
-| [[CMSSW]] || 2_0_6 || [https://twiki.cern.ch/twiki/bin/view/CMS CMS Software Twiki]
-|-
-| [[SAS]] || 9.1 || [http://www.sas.com SAS]
 |-
-| [[Stata]] || 10 || [http://www.stata.com/ Stata]
 |}

Difference between revisions of "Installed Software"

Revision as of 16:29, 30 May 2008

Software

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