Difference between revisions of "Freesurfer"
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(New page: ==Environment Variables== In order for Freesurfer to work, the followings environment variables need to be set: In bash: <pre> $ export FREESURFER_HOME=/apps/freesurfer </pre> In tcsh: <p...) |
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| Line 5: | Line 5: | ||
<pre> | <pre> | ||
$ export FREESURFER_HOME=/apps/freesurfer | $ export FREESURFER_HOME=/apps/freesurfer | ||
| + | $ source $FREESURFER_HOME/SetUpFreeSurfer.sh | ||
</pre> | </pre> | ||
In tcsh: | In tcsh: | ||
<pre> | <pre> | ||
$ setenv FREESURFER_HOME /apps/freesurfer | $ setenv FREESURFER_HOME /apps/freesurfer | ||
| + | $ source $FREESURFER_HOME/SetUpFreeSurfer.csh | ||
</pre> | </pre> | ||
Revision as of 14:54, 28 June 2007
Environment Variables
In order for Freesurfer to work, the followings environment variables need to be set:
In bash:
$ export FREESURFER_HOME=/apps/freesurfer $ source $FREESURFER_HOME/SetUpFreeSurfer.sh
In tcsh:
$ setenv FREESURFER_HOME /apps/freesurfer $ source $FREESURFER_HOME/SetUpFreeSurfer.csh