Difference between revisions of "Installed Software"

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The following is a list of the installed software packages maintained at the UF HPC Center
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#REDIRECT [[Applications]]
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==Software==
 
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{| border="1"
 
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! Software !! Version !! Home Website
 
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| [[Abaqus]] || 6.6-1 || [http://www.abaqus.com/ www.abaqus.com]
 
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| [[Adina]] || 8.3 || [http://www.adina.com/ www.adina.com]
 
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| [[Amber]] || 9 || [http://amber.scripps.edu/ amber.scripps.edu]
 
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| [[Ansys]] || 10.0 || [http://www.ansys.com/ www.ansys.com]
 
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| [[AUTO3DEM]] || 3.05 || [http://cryoem.ucsd.edu/programs.shtm cryoem.ucsd.edu]
 
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| [[Blender]] || 2.45 || [http://www.blender.org www.blender.org]
 
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| [[ccp4]] || 6.0.2 || [http://www.ccp4.ac.uk/main.html www.ccp4.ac.uk]
 
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| [[CMSSW]] || 2_0_6 || [https://twiki.cern.ch/twiki/bin/view/CMS CMS Software Twiki]
 
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| [[cnssolve]] || 1.2 || [http://cns.csb.yale.edu/v1.1/ cns.csb.yale.edu]
 
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| [[Crystal]] || 1.0.2 ||  
 
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| [[CPMD]] || 3.11.1 || [http://www.cpmd.org/ www.cpmd.org];
 
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| [[dlpoly]] || 3.0.7 || [http://www.cse.clrc.ac.uk/ccg/software/DL_POLY/index.shtml www.cse.clrc.ac.uk]
 
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| [[dock]] || 6.1 || [http://dock.compbio.ucsf.edu/ dock.compbio.ucsf.edu]
 
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| [[Eman]] || 1.8 || [http://blake.bcm.tmc.edu/eman/ blake.bcm.tms.edu]
 
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| [[Ensight]] || 8.2 || [http://www.ensight.com/ www.ensight.com]
 
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| [[Fragstats]] || 2.0 || [http://www.umass.edu/landeco/research/fragstats/fragstats.html www.umass.edu]
 
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| [[FSL]] || 3.3.11 || [http://www.fmrib.ox.ac.uk/fsl/ www.fmrib.ox.ac.uk]
 
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| [[Garli]] || 0.942 || [http://www.bio.utexas.edu/faculty/antisense/garli/Garli.html Garli]
 
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| [[gaussian]] || 03 || [http://www.gaussian.com/ www.gaussian.com]
 
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| [[Geant]] || 4.8.2 || [http://geant4.web.cern.ch/geant4/ geant4.web.cern.ch]
 
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| [[Gromacs]] || 3.3.1 || [http://www.gromacs.org/ www.gromacs.org]
 
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| [[GULP]] || 3.1 || [https://www.ivec.org/GULP/ www.ivec.org]
 
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| [[hypre]] || 2.0.0 || [http://www.llnl.gov/casc/hypre/software.html Lawrence Livermore National Labs]
 
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| [[Matlab]] || 7.6 || [http://www.mathworks.com www.mathworks.com]
 
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| [[meme]] || 3.0.13 || [http://meme.sdsc.edu/meme/intro.html meme.sdsc.edu]
 
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| [[metis]] || 4.0 || [http://glaros.dtc.umn.edu/gkhome/views/metis glaros.dtc.umn.edu]
 
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| [[mpiBlast]] || 1.5.0 || [http://www.ncbi.nlm.nih.gov/ NCBI]
 
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| [[MrBayes]] || 3.1.2 || [http://mrbayes.scs.fsu.edu/ mrbayes.scs.fsu.edu]
 
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| [[NAMD]] || 2.6 || [http://www.ks.uiuc.edu/Research/namd/ www.ks.uiuc.edu]
 
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| [[PWscf]] || 3.0 || [http://www.pwscf.org/download.htm www.pwscf.org]
 
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| [[Rosetta]] || 2.1.2 || [https://www.rosettacommons.org/ www.rosettacommons.org]
 
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| [[R]] || 2.5.0 || [http://www.r-project.org www.r-project.org]
 
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| [[SAS]] || 9.1 || [http://www.sas.com SAS]
 
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| [[Siesta]] || 2.0 || [http://www.uam.es/departamentos/ciencias/fismateriac/siesta/ www.uam.es]
 
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| [[Stata]] || 10 || [http://www.stata.com/ Stata]
 
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| [[VASP]] || 4.6.28 || [http://cms.mpi.univie.ac.at/vasp/ cms.mpi.univie.ac.at]
 
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|}
 
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==Libraries==
 
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{| Border="1"
 
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! Library !! Version !! Compiler !! Location
 
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| [[FFTW]] || 2.1.5 || Intel || /opt/intel/fftw/2.1.5/lib
 
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|}
 

Latest revision as of 17:41, 28 September 2017

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