Difference between revisions of "Autometa"
Jump to navigation
Jump to search
Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
|||
| Line 24: | Line 24: | ||
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
Latest revision as of 21:19, 6 December 2019
Description
An automated binning pipeline for single metagenomes, in particular host-associated and highly complex ones.
Environment Modules
Run module spider autometa to find out what environment modules are available for this application.
System Variables
- HPC_AUTOMETA_DIR - installation directory
- HPC_AUTOMETA_BIN - executable directory
Citation
If you publish research that uses autometa you have to cite it as follows: