Difference between revisions of "Installed Software"

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The following is a list of the installed software packages maintained at the UF HPC Center
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#REDIRECT [[Applications]]
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==Software==
 
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{| border="1"
 
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! Software !! Version !! Home Website
 
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| [[hypre]] || 2.0.0 || [http://www.llnl.gov/casc/hypre/software.html Lawrence Livermore National Labs]
 
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| [[GULP]] || 3.0.1 || [https://www.ivec.org/GULP/ www.ivec.org]
 
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| [[Gromacs]] || 3.3.1 || [http://www.gromacs.org/ www.gromacs.org]
 
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| [[Amber]] || 9 || [http://amber.scripps.edu/ amber.scripps.edu]
 
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| [[gaussian]] || 03 || [http://www.gaussian.com/ www.gaussian.com]
 
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| [[Abaqus]] || 6.6-1 || [http://www.abaqus.com/ www.abaqus.com]
 
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| [[Adina]] || 8.3 || [http://www.adina.com/ www.adina.com]
 
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| [[Ansys]] || 10.0 || [http://www.ansys.com/ www.ansys.com]
 
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| [[mpiBlast]] || 1.3.0 || [http://www.ncbi.nlm.nih.gov/ NCBI]
 
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| [[ccp4]] || 6.0.2 || [http://www.ccp4.ac.uk/main.html www.ccp4.ac.uk]
 
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| [[Ensight]] || 8.2 || [http://www.ensight.com/ www.ensight.com]
 
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| [[cnssolve]] || 1.1 || [http://cns.csb.yale.edu/v1.1/ cns.csb.yale.edu]
 
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| [[dlpoly]] || 3.0.2 || [http://www.cse.clrc.ac.uk/ccg/software/DL_POLY/index.shtml www.cse.clrc.ac.uk]
 
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| [[dock]] || 6.0 || [http://dock.compbio.ucsf.edu/ dock.compbio.ucsf.edu]
 
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| [[Eman]] || 1.8 || [http://blake.bcm.tmc.edu/eman/ blake.bcm.tms.edu]
 
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| [[PWscf]] || 3.0 || [http://www.pwscf.org/download.htm www.pwscf.org]
 
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| [[Fragstats]] || 2.0 || [http://www.umass.edu/landeco/research/fragstats/fragstats.html www.umass.edu]
 
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| [[FSL]] || 3.3 || [http://www.fmrib.ox.ac.uk/fsl/ www.fmrib.ox.ac.uk]
 
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| [[Geant]] || 4.8.2 || [http://geant4.web.cern.ch/geant4/ geant4.web.cern.ch]
 
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| [[meme]] || 3.0.13 || [http://meme.sdsc.edu/meme/intro.html meme.sdsc.edu]
 
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| [[metis]] || 4.0 || [http://glaros.dtc.umn.edu/gkhome/views/metis glaros.dtc.umn.edu]
 
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| [[NAMD]] || 2.6 || [http://www.ks.uiuc.edu/Research/namd/ www.ks.uiuc.edu]
 
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| [[R]] || 2.2.1 || [http://www.r-project.org www.r-project.org]
 
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| [[Rosetta]] || 2.1.1 || [https://www.rosettacommons.org/ www.rosettacommons.org]
 
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| [[Siesta]] || 2.0 || [http://www.uam.es/departamentos/ciencias/fismateriac/siesta/ www.uam.es]
 
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| [[VASP]] || 4.6.28 || [http://cms.mpi.univie.ac.at/vasp/ cms.mpi.univie.ac.at]
 
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|}
 
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==Software Not Installed==
 
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* [[Matlab]] - We do not have a license for this softare, but it is possible to export matlab programs into executable binaries using the matlab compiler, and then run those executables on the cluster.
 

Latest revision as of 17:41, 28 September 2017

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