View source for MRIcron

[[Category:Software]][[Category:Biology]][[Category:Imaging]]
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|{{#vardefine:app|mricron}}
|{{#vardefine:url|http://www.mccauslandcenter.sc.edu/mricro/mricron/}}
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Chris Rorden's MRIcron. This modules provides the full MRIcron package although it was primarily installed to provide dcm2nii for the nipype, which attempts to convert images from the proprietary scanner format to the NIfTI format used by FSL, SPM5, MRIcron and many other brain imaging tools. NIfTI is a modern incarnation of the Analyze format, but includes important information like the orientation of the image. DCM2NII is a stand-alone program that is distributed with MRIcron. GUI tools from this package can only be run on the gui.rc.ufl.edu machine as described in [[GUI_Programs]].
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==Environment Modules==
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==System Variables==
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
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{{#if: {{#var: citation}}|==Citation==
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{{#if: {{#var: installation}}|==Installation==
See the [[{{PAGENAME}}_Install]] page for {{#var: app}} installation notes.|}}
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