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• Blender
  |{{#vardefine:testing|}} <!--TESTING/PROFILING--> ...es not have any audio hardware built in, nor would it be audible since the hardware is installed in a separate room. As such, the blender command has been alia
  2 KB (295 words) - 13:03, 15 August 2022
• Intel Compilers and Libraries
  |{{#vardefine:testing|}} <!--PROFILING--> ==Compiling for the right hardware==
  5 KB (612 words) - 18:04, 27 September 2023
• Account and QOS limits under SLURM
  ...oup on HiPerGator (HPG) must have an '''investment''' with a corresponding hardware allocation to be able to do any work on HPG. Each allocation is associated ...count the QOS limits based on the group investment, the limitations of the hardware (compute nodes), and the desire to be a good neighbor on a shared resource
  8 KB (1,354 words) - 18:36, 9 February 2024
• Proteinortho
  |{{#vardefine:testing|}} <!--TESTING/PROFILING--> multi-core hardware. It implements an extended version of the reciprocal
  2 KB (302 words) - 20:27, 12 August 2022
• OPENACC
  |{{#vardefine:testing|}} <!--PROFILING--> ...s interested in porting their codes to a wide-variety of heterogeneous HPC hardware platforms and architectures with significantly less programming effort than
  2 KB (291 words) - 12:01, 26 August 2022
• OpenCV
  |{{#vardefine:testing|}} <!--PROFILING--> ...f multi-core processing. Enabled with OpenCL, it can take advantage of the hardware acceleration of the underlying heterogeneous compute platform.
  2 KB (283 words) - 21:31, 6 December 2019
• Slurm
  |{{#vardefine:testing|}} <!--PROFILING--> ...nd other functions and conditions. on HiPerGator we use Slurm for managing hardware resources and scheduling workloads whether those submitted directly to the
  5 KB (763 words) - 17:37, 5 March 2024
• SST-Core
  |{{#vardefine:testing|}} <!--PROFILING--> ...imulation platform that provides a framework to connect multiple simulated hardware objects including CPUs, network, memory, etc. Simulations using the toolkit
  3 KB (324 words) - 21:24, 6 December 2019
• Counterr
  |{{#vardefine:testing|}} <!--PROFILING--> ...r uncovering systematic errors latent in the sequencing technology (due to hardware, basecaller, etc.).
  3 KB (342 words) - 21:15, 6 December 2019
• WU BLAST
  |{{#vardefine:testing|}} <!--TESTING/PROFILING--> * no special/expensive hardware requirements or usage restrictions
  3 KB (356 words) - 17:44, 22 August 2022
• AlphaMate
  |{{#vardefine:testing|}} <!--PROFILING--> ...ware only runs on Intel CPU's, make sure to request a partition with Intel hardware.
  3 KB (338 words) - 13:46, 9 May 2023
• Rapidsai
  |{{#vardefine:testing|}} <!--PROFILING--> ...censed under Apache 2.0, RAPIDS is incubated by NVIDIA® based on extensive hardware and data science science experience. RAPIDS utilizes NVIDIA CUDA® primitiv
  3 KB (348 words) - 21:29, 21 August 2022
• PAPI
  |{{#vardefine:testing|}} <!--Enable performance testing/profiling section --> ...specifies a standard application programming interface (API) for accessing hardware performance counters available on most modern microprocessors. These counte
  3 KB (360 words) - 16:36, 21 August 2022
• Metilene
  |{{#vardefine:testing|}} <!--PROFILING--> ...multiple groups of samples in minutes rather than days using off-the-shelf hardware. metilene outperforms other state-of-the-art tools for low coverage data an
  3 KB (375 words) - 19:39, 18 August 2022
• Chipyard
  |{{#vardefine:testing|}} <!--PROFILING--> ...a full featured SoC. Chipyard supports multiple concurrent flows of agile hardware development, including software RTL simulation, FPGA-accelerated simulation
  3 KB (360 words) - 14:30, 11 October 2022
• SNAP
  |{{#vardefine:testing|}} <!--PROFILING--> ...is part of a gene sequencing pipeline. It takes data from gene sequencing hardware that consists of short chunks of DNA (typically 70-300 base pairs long) cal
  3 KB (372 words) - 20:42, 12 August 2022
• AltAnalyze
  |{{#vardefine:testing|}} <!--PROFILING--> ...ced knowledge of bioinformatics programs or scripting or advanced computer hardware. User friendly videos, online tutorials and blog posts are also available.
  3 KB (398 words) - 19:14, 10 June 2022
• MANTA
  |{{#vardefine:testing|}} <!--PROFILING--> ...nt workflow. The method is designed for rapid analysis on standard compute hardware: NA12878 at 50x genomic coverage is analyzed in less than 20 minutes on a 2
  3 KB (432 words) - 19:27, 10 June 2022
• HLAminer
  |{{#vardefine:testing|}} <!--PROFILING--> ...eference HLA alleles from the IMGT/HLA sequence repository using commodity hardware with standard specifications (<2GB RAM, 2GHz). Putative HLA types are infer
  4 KB (541 words) - 14:55, 14 December 2022
• SHAPEIT4
  |{{#vardefine:testing|}} <!--PROFILING--> The genotype graph and HMM routines have been re-implemented for better hardware usage and performance.
  5 KB (617 words) - 19:22, 14 December 2022

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