Spanki

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Description

spanki website  

Spanki is a set of tools to facilitate analysis of alternative splicing from RNA-Seq data. Spanki compiles quantitative and qualitative information about junction alignments from input BAM files, and analyzes junction-level splicing along with pairwise-defined splicing events. A simulator is also included to evaluate junction detection performance.

Required Modules

Serial

  • spanki





Validation

  • Validated 4/5/2018