PluMiST

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Description

plumist website  

PluMiST is a computer program to reconstruct and evaluate majority rule supertrees: MR(-), MR(+) and MR(+)g. It searches tree space by NNI (nearest-neighbor interchange) and TDR (taxa-deletion-reinsertion). Only fully resolved input and supertrees are considered, multifurcating trees may be returned as the strict consensus of equally best scoring trees.

Required Modules

Serial

  • plumist

System Variables

  • HPC_PLUMIST_DIR - installation directory
  • HPC_PLUMIST_BIN - executable directory
  • HPC_PLUMIST_DOC - documentation directory
  • HPC_PLUMIST_EX - examples directory





Validation

  • Validated 4/5/2018