Oncotator

Description

oncotator website  

Oncotator is a tool for annotating human genomic point mutations and indels with data relevant to cancer researchers.

Required Modules

Serial

• oncotator

System Variables

• HPC_ONCOTATOR_DIR - installation directory

Citation

If you publish research that uses oncotator you have to cite it as follows:

Alex H. Ramos, Lee Lichtenstein, Manaswi Gupta, Michael S. Lawrence, Trevor J. Pugh, Gordon Saksena, Matthew Meyerson and Gad Getz. Oncotator: Cancer Variant Annotation Tool. Human Mutation (2015).