NGSUtils
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Description
NGSUtils is a suite of software tools for working with next-generation sequencing datasets. They are useful for processing Illumia, SOLiD, 454, Ion Torrent, and PacBio sequencing data. They can be used for DNA and RNA resequencing, ChIP-Seq, CLIP-Seq, and targeted resequencing (Agilent exome capture and PCR targeting).
Required Modules
Serial
- ngsutils
System Variables
- HPC_NGSUTILS_DIR - installation directory
Citation
If you publish research that uses ngsutils you have to cite it as follows:
Marcus R. Breese and Yunlong Liu NGSUtils: a software suite for analyzing and manipulating next-generation sequencing datasets Bioinformatics (2013) 29(4): 494-496
Validation
- Validated 4/5/2018
