ALE

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Description

ale website  

Assembly Likelihood Estimator ALE is a probabalistic framework for determining the likelihood of an assembly given the data (raw reads) used to assemble it. It allows for the rapid discovery of errors and comparisons between similar assemblies.

Required Modules

Serial

  • ale

System Variables

  • HPC_ALE_DIR - installation directory




Citation

If you publish research that uses ale you have to cite it as follows:

ALE: a generic assembly likelihood evaluation framework for assessing the accuracy of genome and metagenome assemblies